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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mbnl1, Muscleblind-like 1 (Drosophila)
Sequence ID:NM_020007
NM_001253708
NM_001253713
NM_001253711
NM_001253710
NM_001253709
Entrez Gene ID:56758
Ensembl ID:ENSMUSG00000027763

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 E1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 60501251 - 60629380

Transcript StartTranscript EndChromosomal Start Chromosomal End
11726030517360305344
17312216033267760333725
122213926039951560399685
139315936040761560407815
159418516041718460417441
185220056041954160419694
200620416042534460425379
204221366042606760426161
213722116042904560429119
221255806043030160433669

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4976244Full LengthBC096600muscleblind-like 1 (Drosophila)
1511990IncompleteBC037510muscleblind-like 1 (Drosophila)
6442315IncompleteBC060031muscleblind-like 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064391  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253708 NP_001240637 Q9JKP5  
NM_001253709 NP_001240638    
NM_001253710 NP_001240639    
NM_001253711 NP_001240640    
NM_001253713 NP_001240642    
NM_020007 NP_064391   zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
AF231110 AAF72159 Q9JKP5
BC096600 AAH96600 Q4VA08
AK038242 BAC29950 Q8CAQ1
AB093240 BAC41424 Q8CHF5
AK153827 BAE32199 Q3U581
AK153848 BAE32210 Q3U570

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mbnl1 NP_064391 H.sapiens MBNL1 4154 Gene Info NP_997176 100
R.norvegicus Mbnl1 282635   XP_002729084 100
D.melanogaster mbl 36945   NP_001137689 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)