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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sohlh2, Spermatogenesis and oogenesis specific basic helix-loop-helix 2
Sequence ID:NM_028937
Entrez Gene ID:74434
Ensembl ID:ENSMUSG00000027794

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 C|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 55182043 - 55209950

 Exon Info From UCSC:
NM_028937

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40092728Full LengthBC120917spermatogenesis and oogenesis specific basic helix-loop-helix 2
40092729Full LengthBC120918spermatogenesis and oogenesis specific basic helix-loop-helix 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083213  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028937 NP_083213 Q9D489 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC120917 AAI20918 Q9D489
BC120918 AAI20919 Q9D489
DQ086115 AAY86077 Q9D489
AK016704 BAB30389 Q9D489

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sohlh2 NP_083213 R.norvegicus Sohlh2 619575   NP_001030133 86
H.sapiens SOHLH2 54937 Gene Info NP_060296 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)