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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Klhdc3, kelch domain containing 3
Sequence ID:NM_001163729
NM_027910
Entrez Gene ID:71765
Ensembl ID:ENSMUSG00000063576

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17 24.31 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46674552 - 46680801

 Exon Info From UCSC:
NM_001163729
NM_027910

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3983436Full LengthBC018154kelch domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082186  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163729 NP_001157201    
NM_027910 NP_082186   Kelch_1
Kelch_2

Related Sequences

 
mRNAGenPeptSwissProt
BC018154 AAH18154 Q8VEM9
AK004964 BAB23704 Q8VEM9
AB053465 BAB62016 Q8VEM9
AK141673 BAE24793 Q8VEM9
AK170623 BAE41917 Q8VEM9
AJ278127 CAC34582 Q8VEM9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Klhdc3 NP_001157201 R.norvegicus Klhdc3 363192   NP_001012203 99
H.sapiens KLHDC3 116138 Gene Info NP_476502 97
D.melanogaster CG12081 31799   NP_572494 52
A.gambiae AgaP_AGAP009495 1271415   XP_310200 52
C.elegans F53E4.1 180050   NP_506895 45
A.thaliana AT1G18610 838442   NP_173296 33
A.thaliana AT1G74150 843755   NP_177555 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)