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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ophn1, oligophrenin 1
Sequence ID:NM_052976
Entrez Gene ID:94190
Ensembl ID:ENSMUSG00000031214

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X C2

Chromosomal Position (from UCSC)

Chromosomal Position:X: 98558264 - 98890467

 Exon Info From UCSC:
NM_052976

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2650009Full LengthBC004845oligophrenin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443208  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052976 NP_443208 Q99J31 PH
RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
BC004845 AAH04845 Q99J31
AK031419 BAC27395 Q99J31
AK036038 BAC29282 Q99J31
AK043239 BAC31500 Q8C914
AK046214 BAC32639 Q8BQX4
AK082551 BAC38527 Q8C4C7
AK087469 BAC39887 Q99J31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ophn1 NP_443208 R.norvegicus Ophn1 312108   NP_001101318 95
H.sapiens OPHN1 4983 Gene Info NP_002538 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta