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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cisd1, CDGSH iron sulfur domain 1
Sequence ID:NM_134007
Entrez Gene ID:52637
Ensembl ID:ENSMUSG00000037710

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B5.3|10 38.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 71330493 - 71344849

NM_134007 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16337079324170793873
6348397079896170799166
8409657080747170807596

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4236502Full LengthBC013522CDGSH iron sulfur domain 1
5102315Full LengthBC021952CDGSH iron sulfur domain 1
5123692Full LengthBC019860CDGSH iron sulfur domain 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134007 NP_598768 Q91WS0  

Related Sequences

 
mRNAGenPeptSwissProt
BC013522 AAH13522 Q91WS0
BC019860 AAH19860 Q91WS0
BC021952 AAH21952 Q91WS0
AK075907 BAC36046 Q91WS0
AK131605 BAE20715 Q91WS0
AK131812 BAE20814 Q91WS0
AK131995 BAE20925 Q91WS0
AK167898 BAE39909 Q91WS0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cisd1 NP_598768 R.norvegicus Cisd1 294362   NP_001099855 97
H.sapiens CISD1 55847 Gene Info NP_060934 86
C.elegans W02B12.15 3565570   NP_001122648 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)