Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cln8, ceroid-lipofuscinosis, neuronal 8
Sequence ID:NM_012000
Entrez Gene ID:26889
Ensembl ID:ENSMUSG00000026317

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8 6.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 14889045 - 14897284

NM_012000 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15831488853514889117
58412421489457114895229
124364311489653014901718

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4188527Full LengthBC021625ceroid-lipofuscinosis, neuronal 8

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012000 NP_036130 Q542J5
Q9QUK3
 

Related Sequences

 
mRNAGenPeptSwissProt
AF125307 AAF04461 Q542J5
Q9QUK3
AF125308 AAF04462 Q542J5
Q9QUK3
BC021625 AAH21625 Q542J5
Q9QUK3
AK049145 BAC33570 Q542J5
Q9QUK3
AK080049 BAC37816 Q8BNW2
AK088300 BAC40269 Q542J5
Q9QUK3
AK089692 BAC40944 Q542J5
Q9QUK3
AK164268 BAE37712 Q542J5
Q9QUK3
AK166905 BAE39107 Q542J5
Q9QUK3
AK169698 BAE41313 Q542J5
Q9QUK3
AK171446 BAE42456 Q542J5
Q9QUK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cln8 NP_036130 R.norvegicus Cln8 306619   NP_001007687 93
H.sapiens CLN8 2055 Gene Info NP_061764 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)