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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc10a4, solute carrier family 10 (sodium/bile acid cotransporter family), member 4
Sequence ID:NM_173403
Entrez Gene ID:231290
Ensembl ID:ENSMUSG00000029219

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 73006903 - 73012952

NM_173403 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17537339814273398894
7549647339959873399808
96520857340307373404193

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861067Full LengthBC138048solute carrier family 10 (sodium/bile acid cotransporter family), member 4
40130806Full LengthBC132529solute carrier family 10 (sodium/bile acid cotransporter family), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775579  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173403 NP_775579 Q3UEZ8 SBF

Related Sequences

 
mRNAGenPeptSwissProt
BC132529 AAI32530 A2RTJ6
Q3UEZ8
BC138048 AAI38049 A2RTJ6
AK087479 BAC39890 Q3UEZ8
AK149202 BAE28763 Q3UEZ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc10a4 NP_775579 R.norvegicus Slc10a4 305309   NP_001008555 95
H.sapiens SLC10A4 201780 Gene Info NP_689892 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)