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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlx3, T cell leukemia, homeobox 3
Sequence ID:NM_019916
Entrez Gene ID:27140
Ensembl ID:ENSMUSG00000040610

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A5|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 33201278 - 33203459

NM_019916 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17383310075133101488
7399823310242833102671
98315323310303833103587

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9054199Full LengthBC145631T-cell leukemia, homeobox 3
9055920Full LengthBC141308T-cell leukemia, homeobox 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064300  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019916 NP_064300 O55144 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC141308 AAI41309 Q5SQB4
BC145631 AAI45632 Q5SQB4
AK141870 BAE24864 Q5SQB4
AJ223801 CAA11551 O55144

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlx3 NP_064300 H.sapiens TLX3 30012 Gene Info NP_066305 100
R.norvegicus Tlx3 497881   XP_573065 100
D.melanogaster C15 42544   NP_476873 67
A.gambiae AgaP_AGAP003674 1274348   XP_313455 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)