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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mta2, metastasis-associated gene family, member 2
Sequence ID:NM_011842
Entrez Gene ID:23942
Ensembl ID:ENSMUSG00000071646

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19|19 B

Chromosomal Position (from UCSC)

Chromosomal Position:19: 8942044 - 8952279

 Exon Info From UCSC:
NM_011842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6419411Full LengthBC079847metastasis-associated gene family, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035972  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011842 NP_035972 Q9R190 Myb_DNA-binding
GATA
BAH
ELM2

Related Sequences

 
mRNAGenPeptSwissProt
AF159259 AAD51281 Q9R190
BC079847 AAH79847 Q9R190
AK088158 BAC40180 Q9R190
AK147099 BAE27675 Q9R190
AK149834 BAE29113 Q3UDZ8
AK157717 BAE34165 Q3TZP3
AK159979 BAE35530 Q9R190

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mta2 NP_035972 H.sapiens MTA2 9219 Gene Info NP_004730 99
R.norvegicus Mta2 361724   NP_001094210 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)