Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Spef1, Sperm flagellar 1
Sequence ID:NM_027641
Entrez Gene ID:70997
Ensembl ID:ENSMUSG00000027329

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 131171037 - 131174831

NM_027641 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11530130995996130997525
15311654130997637130997760
16551709130997939130997993
17101749130998105130998144
17501906130998358130998514
19072018130998931130999042
20192264131000300131000545

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3590641Full LengthBC006046sperm flagellar 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027641 NP_081917 Q99JL1  

Related Sequences

 
mRNAGenPeptSwissProt
BC006046 AAH06046 Q99JL1
AY860964 AAX56299 Q99JL1
AK046964 BAC32928 Q99JL1
AK047675 BAC33121 Q99JL1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Spef1 NP_081917 H.sapiens SPEF1 25876 Gene Info NP_056232 89
A.gambiae AgaP_AGAP008402 1277578   XP_317050 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)