Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4
Sequence ID:NM_015730
Entrez Gene ID:11438
Ensembl ID:ENSMUSG00000027577

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2 108.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 181024692 - 181039075

NM_015730 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
732641180757015180759583
26424016180762902180764276
40174126180768624180768733
41274171180768813180768857
41724323180772123180772274
43244509180773696180773881

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5706867Full LengthBC053013cholinergic receptor, nicotinic, alpha polypeptide 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056545  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015730 NP_056545 Q53YK0
O70174
Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
AF225912 AAF34716 O70174
BC053013 AAH53013 Q53YK0
O70174
AF325347 AAL37363 O70174
AY574263 AAS90359 Q53YK0
O70174
AK034228 BAC28638 Q53YK0
O70174
AK083157 BAC38788 Q53YK0
O70174
AK136886 BAE23155 Q53YK0
O70174
AK143938 BAE25619 Q53YK0
O70174

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrna4 NP_056545 R.norvegicus Chrna4 25590   NP_077330 96
H.sapiens CHRNA4 1137 Gene Info NP_000735 85
A.gambiae AgaP_AGAP000966 1270461   XP_309158 54
D.melanogaster nAcRbeta-64B 38545   NP_523927 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)