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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Baz2a, bromodomain adjacent to zinc finger domain, 2A
Sequence ID:XM_003945867
XM_003945868
XM_003945869
XM_003945870
XM_003945871
XM_003945872
NM_054078
Entrez Gene ID:116848
Ensembl ID:ENSMUSG00000040054

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128109006 - 128126753

 Exon Info From UCSC:
NM_054078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062726Full LengthBC156872bromodomain adjacent to zinc finger domain, 2A
3493939IncompleteBC038012bromodomain adjacent to zinc finger domain, 2A
3980655IncompleteBC020083bromodomain adjacent to zinc finger domain, 2A
4193325IncompleteBC078632bromodomain adjacent to zinc finger domain, 2A
6308302IncompleteBC058241bromodomain adjacent to zinc finger domain, 2A
6491361IncompleteBC048415bromodomain adjacent to zinc finger domain, 2A
100015492BC148495bromodomain adjacent to zinc finger domain, 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473419  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_054078 NP_473419 Q91YE5 Bromodomain
PHD
MBD
AT_hook
DDT

Related Sequences

 
mRNAGenPeptSwissProt
BC020083 AAH20083 Q05CX2
BC038012 AAH38012 Q8CGH2
BC048415 AAH48415 Q80VL8
BC058241 AAH58241 Q6PE75
BC148495 AAI48496  
BC156872 AAI56873  
AK043800 BAC31656 Q8BRP6
AK122243 BAC65525 Q91YE5
AK133149 BAE21532 Q3V0H2
AK135732 BAE22634 Q3UXC9
AK140558 BAE24422 Q3USB1
AK149353 BAE28829 Q3UET2
AK155523 BAE33307 Q91YE5
AJ309544 CAC69992 Q91YE5
XM_003945867 XP_003945916  
XM_003945868 XP_003945917  
XM_003945869 XP_003945918  
XM_003945870 XP_003945919  
XM_003945871 XP_003945920  
XM_003945872 XP_003945921  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Baz2a NP_473419 R.norvegicus Baz2a 304601   NP_001100628 92
H.sapiens BAZ2A 11176 Gene Info NP_038477 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)