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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ttf1, transcription termination factor, RNA polymerase I
Sequence ID:NM_009442
Entrez Gene ID:22130
Ensembl ID:ENSMUSG00000026803

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 29064625 - 29086125

 Exon Info From UCSC:
NM_009442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6847867Full LengthBC059011transcription termination factor, RNA polymerase I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033468  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009442 NP_033468 Q62187 Myb_DNA-binding

Related Sequences

 
mRNAGenPeptSwissProt
AF237703 AAF43448 Q62187
BC059011 AAH59011 Q62187
AK053589 BAC35440 Q8BPQ1
AK163606 BAE37417 Q3TQG6
X83974 CAA58808 Q62187

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ttf1 NP_033468 R.norvegicus Ttf1 499766   XP_575102 84
H.sapiens TTF1 7270 Gene Info NP_031370 53
A.thaliana AT5G41020 834104   NP_198918 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)