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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bbs5, Bardet-Biedl syndrome 5 (human)
Sequence ID:NM_028284
Entrez Gene ID:72569
Ensembl ID:ENSMUSG00000063145

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 C3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 69647170 - 69667318

 Exon Info From UCSC:
NM_028284

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6771365Full LengthBC061031Bardet-Biedl syndrome 5 (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082560  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028284 NP_082560 Q9CZQ9 DUF1448

Related Sequences

 
mRNAGenPeptSwissProt
BC061031 AAH61031 Q9CZQ9
AK012283 BAB28141 Q9CZQ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bbs5 NP_082560 R.norvegicus Bbs5 362142   NP_001102053 100
H.sapiens BBS5 129880 Gene Info NP_689597 96
A.gambiae AgaP_AGAP001301 1281875   XP_321845 54
D.melanogaster CG1126 40600   NP_649499 50
C.elegans bbs-5 187516   NP_499272 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)