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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pgd, phosphogluconate dehydrogenase
Sequence ID:NM_001081274
NM_025801
Entrez Gene ID:110208
Ensembl ID:ENSMUSG00000028961

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4 77.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 149149993 - 149166668


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3155100Full LengthBC014793phosphogluconate dehydrogenase
3155147Full LengthBC008646phosphogluconate dehydrogenase
3984654Full LengthBC011329phosphogluconate dehydrogenase

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001081274 NP_001074743 Q9DCD0 EC 1.1.1.44  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008646 AAH08646 Q91V28  
BC011329 AAH11329 Q91V28  
BC014793 AAH14793 Q91YT9  
AK002894 BAB22439 Q9DCD0 EC 1.1.1.44
AK145602 BAE26535 Q9DCD0 EC 1.1.1.44
AK150210 BAE29381 Q9DCD0 EC 1.1.1.44
AK150490 BAE29606 Q3UAG2  
AK151380 BAE30352 Q3UAG2  
AK151993 BAE30857 Q3UAG2  
AK152758 BAE31473 Q3UAG2  
AK152894 BAE31577 Q3UAG2  
AK153409 BAE31969 Q9DCD0 EC 1.1.1.44
AK155027 BAE32999 Q9DCD0 EC 1.1.1.44
AK166733 BAE38978 Q9DCD0 EC 1.1.1.44
AK166947 BAE39134 Q9DCD0 EC 1.1.1.44
AK167215 BAE39341 Q9DCD0 EC 1.1.1.44
AK168251 BAE40201 Q9DCD0 EC 1.1.1.44

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pgd NP_001074743 R.norvegicus LOC100360180 100360180   XP_002729611 97
H.sapiens PGD 5226 Gene Info NP_002622 94
D.melanogaster Pgd 31185   NP_476860 73
A.gambiae AgaP_AGAP004197 1274031   XP_313091 72
C.elegans T25B9.9 177971   NP_501998 70
N.crassa NCU03100 3881108   XP_964959 68
S.pombe SPBC660.16 2541146   NP_595095 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)