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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ddx1, DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
Sequence ID:NM_134040
Entrez Gene ID:104721
Ensembl ID:ENSMUSG00000037149

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A1.1|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 13240888 - 13249121

 Exon Info From UCSC:
NM_134040

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3153029Full LengthBC010624DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
3587491Full LengthBC008570DEAD (Asp-Glu-Ala-Asp) box polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598801  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_134040 NP_598801 Q91VR5 EC 3.6.4.13 DEAD
Helicase_C
SPRY

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008570 AAH08570 Q922B8  
BC010624 AAH10624 Q91VR5 EC 3.6.4.13
AK028341 BAC25893 Q91VR5 EC 3.6.4.13
AK053259 BAC35325 Q8BKG1  
AK132157 BAE21002 Q3V1Z7  
AK153335 BAE31914 Q91VR5 EC 3.6.4.13
AK160982 BAE36130 Q91VR5 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddx1 NP_598801 R.norvegicus Ddx1 84474   NP_445866 99
H.sapiens DDX1 1653 Gene Info NP_004930 98
A.gambiae AgaP_AGAP004765 1278460   XP_318051 63
D.melanogaster Ddx1 40457   NP_524212 61
C.elegans Y55F3BR.1 176913   NP_500004 50
P.falciparum PFE1085w 813032   XP_001351774 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)