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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Tmem30b, transmembrane protein 30B
Sequence ID:NM_178715
Entrez Gene ID:238257
Ensembl ID:ENSMUSG00000034435

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 73543801 - 73546389

NM_178715 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733973Full LengthBC119224transmembrane protein 30B
8733975Full LengthBC119226transmembrane protein 30B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848830  

Protein Infomation

NM_178715 NP_848830 Q8BHG3 CDC50

Related Sequences

BC119224 AAI19225 Q0VEI2
BC119226 AAI19227 Q0VEI2
AK030302 BAC26887 Q8BHG3
AK033580 BAC28372 Q8BHG3
AK037246 BAC29774 Q8BHG3
AK169014 BAE40811 Q8BHG3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Tmem30b NP_848830 R.norvegicus Tmem30b 314224   NP_001073849 97
H.sapiens TMEM30B 161291 Gene Info NP_001017970 90
A.gambiae AgaP_AGAP009984 3292103   XP_553877 43
A.thaliana ALIS5 844283   NP_565210 41
A.thaliana ALIS1 820456   NP_566435 40
S.pombe ivn1 2539729   NP_595627 40
A.thaliana AT1G16360 838205   NP_173086 39
A.thaliana AT1G54320 841873   NP_564656 39
S.cerevisiae CDC50 850456   NP_010018 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)