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Gene Info

Gene Information For:Mm. Atp5f1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
Sequence ID:NM_009725
Entrez Gene ID:11950
Ensembl ID:ENSMUSG00000000563

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3 57.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 105942879 - 105959247

NM_009725 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
31231105745780105745980
232411105746604105746783
412537105754508105754633
538701105756935105757098
702847105758813105758958
848884105761779105761815
8851295105762065105762475
12961466105762843105763013
14671486105763146105763165

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6706159Full LengthBC087882ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1
6756180Full LengthBC089574ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009725 NP_033855 Q9CQQ7
Q5I0W0
 

Related Sequences

 
mRNAGenPeptSwissProt
U29530 AAC15084 Q64218
BC049640 AAH49640 Q80W36
BC087882 AAH87882 Q9CQQ7
Q5I0W0
BC089574 AAH89574 Q9CQQ7
Q5I0W0
AK002960 BAB22481 Q9CQQ7
Q5I0W0
AK011312 BAB27538 Q9CQQ7
Q5I0W0
AK149176 BAE28757 Q3UF04
AK158569 BAE34561 Q9CQQ7
Q5I0W0
AK162311 BAE36847 Q9CQQ7
Q5I0W0
AK167480 BAE39561 Q3TJD4
AK167626 BAE39677 Q9CQQ7
Q5I0W0
AK168028 BAE40013 Q9CQQ7
Q5I0W0
AK168041 BAE40023 Q9CQQ7
Q5I0W0
AK168590 BAE40459 Q9CQQ7
Q5I0W0
AK169137 BAE40916 Q9CQQ7
Q5I0W0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp5f1 NP_033855 R.norvegicus Atp5f1 171375   NP_599192 95
H.sapiens ATP5F1 515 Gene Info NP_001679 83
A.gambiae AgaP_AGAP001138 1282029   XP_322024 46
D.melanogaster ATPsyn-b 39143   NP_524011 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)