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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kpnb1, karyopherin (importin) beta 1
Sequence ID:NM_008379
Entrez Gene ID:16211
Ensembl ID:ENSMUSG00000001440

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 D

Chromosomal Position (from UCSC)

Chromosomal Position:11: 97161533 - 97187881

 Exon Info From UCSC:
NM_008379

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6405935Full LengthBC052438karyopherin (importin) beta 1
6518750Full LengthBC055115karyopherin (importin) beta 1
6835239Full LengthBC052711karyopherin (importin) beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032405  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008379 NP_032405 P70168 HEAT
IBN_N

Related Sequences

 
mRNAGenPeptSwissProt
BC004096 AAH04096 Q99KM9
BC052438 AAH52438 P70168
BC052711 AAH52711 Q7TSZ6
BC055115 AAH55115 P70168
D45836 BAA08273 P70168
D67015 BAA11034 P70168
AK147175 BAE27738 Q3UHW8
AK169171 BAE40950 Q3TFE8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kpnb1 NP_032405 H.sapiens KPNB1 3837 Gene Info NP_002256 99
R.norvegicus Kpnb1 24917   NP_058759 99
A.gambiae AgaP_AGAP009921 1279333   XP_319040 65
D.melanogaster Fs(2)Ket 35336   NP_477496 62
C.elegans imb-1 172110   NP_491477 49
S.pombe kap95 2542496   NP_594233 42
A.thaliana AT5G53480 835429   NP_200160 41
N.crassa NCU02011 3881025   XP_964876 40
S.cerevisiae KAP95 851061   NP_013451 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta