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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Eqtn, equatorin, sperm acrosome associated
Sequence ID:NM_027089
Entrez Gene ID:67753
Ensembl ID:ENSMUSG00000028575

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C5|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 94907448 - 94928752

NM_027089 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
315599457398394574511
5607139458661394586766
7147739459035894590417
7748189459161194591655
8198819459225194592313
8829659459363194593714
96611249459501094595168
112512589459536794595500

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6740450Full LengthBC089517RIKEN cDNA 4930579C15 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027089 NP_081365 Q9D9V2  

Related Sequences

 
mRNAGenPeptSwissProt
BC089517 AAH89517 Q9D9V2
DQ336137 ABC69297 Q9D9V2
EU828781 ACJ15282 B7SXT5
EU828782 ACJ15283 B7SXT6
AK006446 BAB24593 Q9D9V2
AB438105 BAH80188 B7SXT5
AB438106 BAH80189 B7SXT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 4930579C15Rik NP_081365 R.norvegicus Afaf 500502   NP_001034434 81
H.sapiens C9orf11 54586 Gene Info NP_065692 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)