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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Jarid2, jumonji, AT rich interactive domain 2
Sequence ID:NM_001205043
NM_001205044
NM_021878
Entrez Gene ID:16468
Ensembl ID:ENSMUSG00000038518

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A5|13 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 44731367 - 44885028


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6406875Full LengthBC052444jumonji, AT rich interactive domain 2
6406875Full LengthBC060695jumonji, AT rich interactive domain 2
3589616IncompleteBC003374jumonji, AT rich interactive domain 2
30024329IncompleteBC050129jumonji, AT rich interactive domain 2
40056280IncompleteBC115758jumonji, AT rich interactive domain 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205043 NP_001191972    
NM_001205044 NP_001191973    
NM_021878 NP_068678 Q62315 ARID
JmjC
JmjN
zf-C5HC2

Related Sequences

 
mRNAGenPeptSwissProt
BC003374 AAH03374 Q62315
BC052444 AAH52444 Q62315
BC060695 AAH60695 Q62315
BC115758 AAI15759 Q1LZL9
D31967 BAA06736 Q62315
AK045214 BAC32264 Q62315
AK147226 BAE27780 Q62315
AK164134 BAE37641 Q62315

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jarid2 NP_068678 H.sapiens JARID2 3720 Gene Info NP_004964 93
A.gambiae AgaP_AGAP005541 1276224   XP_315541 34
D.melanogaster Jarid2 39103   NP_648324 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)