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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccni, cyclin I
Sequence ID:NM_017367
Entrez Gene ID:12453
Ensembl ID:ENSMUSG00000063015

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 E3.3-F1.3

Chromosomal Position (from UCSC)

Chromosomal Position:5: 93182854 - 93206147

NM_017367 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2715149361095893612445
151517459361661393616843
174618869361710593617245
188719619361817293618246
196220909361858993618717
209122489363133093631487
224928309363493993635520

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3583418Full LengthBC003290cyclin I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059063  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017367 NP_059063 Q9Z2V9
Q99LF2
Cyclin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF005886 AAD01253 Q9Z2V9
Q99LF2
BC003290 AAH03290 Q99LF2
AK050465 BAC34271 Q8C7E2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccni NP_059063 R.norvegicus Ccni 289500   NP_001099468 98
H.sapiens CCNI 10983 Gene Info NP_006826 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)