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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Setd1b, SET domain containing 1B
Sequence ID:NM_001040398
NM_177581
Entrez Gene ID:208043
Ensembl ID:ENSMUSG00000038384

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 123157636 - 123167410


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503331IncompleteBC041681SET domain containing 1B
4949423IncompleteBC040775SET domain containing 1B
5364810IncompleteBC038367SET domain containing 1B

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001040398 NP_001035488 Q8CFT2 EC 2.1.1.43  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC038367 AAH38367 Q8CFT2 EC 2.1.1.43
BC040775 AAH40775 Q8CFT2 EC 2.1.1.43
BC041681 AAH41681 Q8CFT2 EC 2.1.1.43
AK122435 BAC65717 Q8CFT2 EC 2.1.1.43
AK141316 BAE24647 Q3URP1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Setd1b XP_003085401 H.sapiens SETD1B 23067 Gene Info NP_055863 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)