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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arnt, aryl hydrocarbon receptor nuclear translocator
Sequence ID:NM_001037737
NM_009709
Entrez Gene ID:11863
Ensembl ID:ENSMUSG00000015522

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.1|3 47.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 95434403 - 95497237

 Exon Info From UCSC:
NM_001037737
NM_009709

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3964932Full LengthBC012870aryl hydrocarbon receptor nuclear translocator

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033839  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037737 NP_001032826 P53762  
NM_009709 NP_033839 Q3ULM2 HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProt
U10325 AAA56717 P53762
U14333 AAA61732 P53762
BC012870 AAH12870 P53762
AK028546 BAC26002 Q8CEC2
AK220458 BAD90487 Q5DTR2
AK141362 BAE24662 Q3URM6
AK145415 BAE26426 Q3ULM2
AK152473 BAE31247 Q3U7X2
AK153355 BAE31928 P53762

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arnt NP_001032826 R.norvegicus Arnt 25242   NP_036912 95
H.sapiens ARNT 405 Gene Info NP_001659 92
A.gambiae AgaP_AGAP009748 1279156   XP_318833 52
C.elegans aha-1 172889   NP_492687 52
D.melanogaster tgo 41084   NP_731308 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta