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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rela, V-rel reticuloendotheliosis viral oncogene homolog A (avian)
Sequence ID:NM_009045
Entrez Gene ID:19697
Ensembl ID:ENSMUSG00000024927

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 B1-3|19 0.5

Chromosomal Position (from UCSC)

Chromosomal Position:19: 5637745 - 5647667

 Exon Info From UCSC:
NM_009045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3157927Full LengthBC094053v-rel reticuloendotheliosis viral oncogene homolog A (avian)
3489295Full LengthBC003818v-rel reticuloendotheliosis viral oncogene homolog A (avian)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009045 NP_033071 Q548Y4
Q04207
RHD
TIG

Related Sequences

 
mRNAGenPeptSwissProt
M61909 AAA39811 Q548Y4
Q04207
BC003818 AAH03818 Q548Y4
Q04207
BC094053 AAH94053 Q548Y4
Q04207
DQ020177 AAY44745 Q4U113
EF460348 ABO60920 A4L9Q2
AK089489 BAC40904 Q8BTL4
AK154630 BAE32727 Q3U3Q8
AK155889 BAE33485 Q548Y4
Q04207
AK157076 BAE33954 Q548Y4
Q04207
AK158072 BAE34348 Q548Y4
Q04207

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rela NP_033071 R.norvegicus Rela 309165   NP_954888 96
H.sapiens RELA 5970 Gene Info NP_068810 89
D.melanogaster dl 35047   NP_724053 41
A.gambiae REL1 1271394   XP_310177 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta