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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lsm11, U7 snRNP-specific Sm-like protein LSM11
Sequence ID:NM_028185
Entrez Gene ID:72290
Ensembl ID:ENSMUSG00000044847

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 45933612 - 45944912

NM_028185 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
157554574177045747524
575658394574792245748005
584059794575086045750999
598064534575796345758436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5294386Full LengthBC094286U7 snRNP-specific Sm-like protein LSM11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082461  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028185 NP_082461 Q8BUV6
Q5SUH5
LSM

Related Sequences

 
mRNAGenPeptSwissProt
BC094286 AAH94286 Q8BUV6
Q5SUH5
AF514309 AAQ08118 Q8BUV6
Q5SUH5
AK008830 BAB25917 Q9CVB3
AK082292 BAC38456 Q8BUV6
Q5SUH5
AK143661 BAE25483 Q8BUV6
Q5SUH5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lsm11 NP_082461 R.norvegicus Lsm11 501688   XP_577085 99
H.sapiens LSM11 134353 Gene Info NP_775762 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)