Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pdss1, prenyl (solanesyl) diphosphate synthase, subunit 1
Sequence ID:NM_019501
Entrez Gene ID:56075
Ensembl ID:ENSMUSG00000026784

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 22895600 - 22940259

 Exon Info From UCSC:
NM_019501

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4039464Full LengthBC026820prenyl (solanesyl) diphosphate synthase, subunit 1
40052625IncompleteBC107273prenyl (solanesyl) diphosphate synthase, subunit 1
40052627IncompleteBC107274prenyl (solanesyl) diphosphate synthase, subunit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062374  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001077190 NP_001070658 Q8CBW3    
NM_001077192 NP_001070660      
NM_001077193 NP_001070661      
NM_007380 NP_031406     SH3_1
SH3_2
Abi_HHR
NM_019501 NP_062374 Q33DR2 EC 2.5.1.91 polyprenyl_synt
NM_145994 NP_666106      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U17698 AAB00373 Q8CBW3  
AF118855 AAD24462 Q33DR2 EC 2.5.1.91
BC004657 AAH04657 Q8CBW3  
BC026820 AAH26820 Q33DR2 EC 2.5.1.91
BC079642 AAH79642 Q6AXD3  
BC107273 AAI07274 Q33DR2 EC 2.5.1.91
BC107274 AAI07275 Q33DR2 EC 2.5.1.91
AY033645 AAK59381 Q8CBW3
Q3TPY5
 
AF420251 AAL16036 Q3TJR5
Q8CBW3
 
AK012307 BAB28153 Q9CZQ1  
AK015028 BAB29683 Q9CUQ6  
AK034476 BAC28722 Q8CBW3  
AK151026 BAE30044 Q8CBW3  
AK151363 BAE30338 Q3UAH6  
AK152061 BAE30917 Q8CBW3  
AK152184 BAE31015 Q8CBW3  
AK153130 BAE31743 Q3TPY5  
AK164040 BAE37600 Q3TPY5  
AK165924 BAE38462 Q3TMI0  
AK167328 BAE39430 Q3TJR5  
AK167568 BAE39631 Q3TJ64  
AK167744 BAE39781 Q3TPY5  
AB210841 BAE48219 Q33DR2 EC 2.5.1.91

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdss1 NP_062374 H.sapiens PDSS1 23590 Gene Info NP_055132 86
A.gambiae AgaP_AGAP000591 4576132   XP_565746 55
D.melanogaster CG31005 43697   NP_733425 53
C.elegans coq-1 172190   NP_491588 48
S.pombe dps1 2541402   NP_595276 47
N.crassa NCU02305 3876064   XP_959949 47
S.cerevisiae COQ1 852288   NP_009557 45
A.thaliana GPS1 818028   NP_001031483 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)