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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Efnb3, ephrin B3
Sequence ID:NM_007911
Entrez Gene ID:13643
Ensembl ID:ENSMUSG00000003934

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 69555848 - 69559855

NM_007911 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1821946936759469369770
219522996937019469370298
230023926937040769370499
239326856937070169370993
268632316937319369373738

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5695418Full LengthBC058617ephrin B3
5695429Full LengthBC052001ephrin B3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031937  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007911 NP_031937 O35393 Ephrin

Related Sequences

 
mRNAGenPeptSwissProt
AF025288 AAC53537 O35393
BC052001 AAH52001 O35393
BC058617 AAH58617 O35393
AK048305 BAC33299 O35393
Q543Q7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Efnb3 NP_031937 R.norvegicus Efnb3 360546   NP_001094450 98
H.sapiens EFNB3 1949 Gene Info NP_001397 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)