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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tmod1, tropomodulin 1
Sequence ID:NM_021883
Entrez Gene ID:21916
Ensembl ID:ENSMUSG00000028328

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B1|4 21.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 46077155 - 46099708

NM_021883 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1884605209346052180
892574607383746074005
2584144609118546091341
4155344609641546096534
5356244610371746103806
6257554610501046105140
7568634610678046106887
86410074610980646109949
100811524611974146119885
115328714612718546128903

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046092Full LengthBC106849tropomodulin 1
40046093Full LengthBC106850tropomodulin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068683  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021883 NP_068683 P49813 Tropomodulin

Related Sequences

 
mRNAGenPeptSwissProt
S76831 AAB33388 P49813
BC106849 AAI06850 P49813
BC106850 AAI06851 P49813

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmod1 NP_068683 R.norvegicus Tmod1 25566   NP_037176 99
H.sapiens TMOD1 7111 Gene Info NP_001159588 97
A.gambiae AgaP_AGAP000969 1270464   XP_309162 41
C.elegans unc-94 172275   NP_491734 41
D.melanogaster tmod 43633   NP_001163777 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)