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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Dync1i2, dynein cytoplasmic 1 intermediate chain 2
Sequence ID:NM_001198872
NM_001198873
NM_001198874
NM_001198875
NM_001198876
NM_001198877
NM_001198878
NM_010064
Entrez Gene ID:13427
Ensembl ID:ENSMUSG00000027012

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C2|2 41.25 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 71212015 - 71263294


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862396Full LengthBC139374dynein cytoplasmic 1 intermediate chain 2
8862397Full LengthBC139375dynein cytoplasmic 1 intermediate chain 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034194  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198872 NP_001185801    
NM_001198873 NP_001185802    
NM_001198874 NP_001185803    
NM_001198875 NP_001185804    
NM_001198876 NP_001185805    
NM_001198877 NP_001185806    
NM_001198878 NP_001185807    
NM_010064 NP_034194 O88487 WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF063231 AAC33446 O88487
BC139374 AAI39375 A2BFF7
BC139375 AAI39376 A2BFF7
GU992208 ADF57195 D6Q0F5
GU992209 ADF57196 D6Q0F6
GU992210 ADF57197 D6Q0F7
GU992211 ADF57198 D6Q0F5
GU992212 ADF57199 D6Q0F6
AK019441 BAB31721 Q9CRN8
AK088015 BAC40097 O88487
AK141837 BAE24852 Q3TPJ8
AK150173 BAE29359 Q3UDA2
AK164322 BAE37738 Q3TPJ8
AK164437 BAE37788 O88487
AK168730 BAE40571 O88487

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dync1i2 NP_034194 R.norvegicus Dync1i2 116659   NP_446332 99
H.sapiens DYNC1I2 1781 Gene Info NP_001369 98
D.melanogaster sw 44160   NP_477075 56
A.gambiae AgaP_AGAP000320 1271943   XP_310802 55
N.crassa NCU09142 3875062   XP_958914 41
C.elegans dyci-1 177440   NP_501038 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)