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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1
Sequence ID:NM_177153
NM_001112739
NM_008421
Entrez Gene ID:16502
Ensembl ID:ENSMUSG00000058975

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46437824 - 46438704

 Exon Info From UCSC:
NM_001112739
NM_008421

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129985Full LengthBC125470potassium voltage gated channel, Shaw-related subfamily, member 1
40130716Full LengthBC132439potassium voltage gated channel, Shaw-related subfamily, member 1
30544346IncompleteBC100546potassium voltage gated channel, Shaw-related subfamily, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032447  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001112739 NP_001106210    
NM_008421 NP_032447 P15388
Q3UHB6
Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
BC125470 AAI25471 Q3UHB6
BC132439 AAI32440 Q3UHB6
AK086765 BAC39740 Q8C364
AK147476 BAE27941 P15388
Q3UHB6
AK147682 BAE28071 P15388
Q3UHB6
AK162964 BAE37138 Q3TR92
Y07521 CAA68814 P15388
Q3UHB6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcnc1 NP_001106210 R.norvegicus Kcnc1 25327   NP_036988 100
H.sapiens KCNC1 3746 Gene Info NP_001106212 100
A.gambiae AgaP_AGAP008201 1277770   XP_317267 52
C.elegans egl-36 181269   NP_509795 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)