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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ncs1, neuronal calcium sensor 1
Sequence ID:NM_019681
Entrez Gene ID:14299
Ensembl ID:ENSMUSG00000062661

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 31246175 - 31292387

NM_019681 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13203110144231101761
3213453112613131126155
3464843113618531136323
4855633113782831137906
5646523113966631139754
6537303114018131140258
7318473114280631142922
84840353114780331150990

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6849193Full LengthBC059825frequenin homolog (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062655  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019681 NP_062655 Q8BNY6 efhand

Related Sequences

 
mRNAGenPeptSwissProt
AF020184 AAD01642 Q8BNY6
BC059825 AAH59825 Q8BNY6
AK079136 BAC37557 Q8BNY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ncs1 NP_062655 H.sapiens NCS1 23413 Gene Info NP_055101 100
R.norvegicus Ncs1 65153   NP_077342 100
C.elegans ncs-1 180448   NP_508186 76
D.melanogaster Frq2 32799   NP_525093 72
D.melanogaster Frq1 32797   NP_001033853 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)