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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tnfsf11, Tumor necrosis factor (ligand) superfamily, member 11
Sequence ID:NM_011613
Entrez Gene ID:21943
Ensembl ID:ENSMUSG00000022015

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D3|14 45.0

Chromosomal Position (from UCSC)

Chromosomal Position:14: 78278575 - 78307889

NM_011613 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
915607867725278678803
156116597868404578684143
166017057868422678684271
170618677869964478699805
186822437870747478707849

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130118Full LengthBC125603tumor necrosis factor (ligand) superfamily, member 11
40130247Full LengthBC131970tumor necrosis factor (ligand) superfamily, member 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035743  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011613 NP_035743 O35235 TNF

Related Sequences

 
mRNAGenPeptSwissProt
AF019048 AAB86812 O35235
AF053713 AAC40113 O35235
AF013170 AAC71061 O35235
BC125603 AAI25604 Q059M3
BC131970 AAI31971 Q059M3
AB008426 BAA25425 O35235
AB032771 BAA97257 O35235
AB032772 BAA97258 O35235
AB036798 BAA97259 O35235
AK159498 BAE35131 O35235

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfsf11 NP_035743 R.norvegicus Tnfsf11 117516   NP_476490 95
H.sapiens TNFSF11 8600 Gene Info NP_003692 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)