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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atxn10, ataxin 10
Sequence ID:NM_016843
Entrez Gene ID:54138
Ensembl ID:ENSMUSG00000016541

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E2|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 85336272 - 85463209

 Exon Info From UCSC:
NM_016843

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3968016Full LengthBC016410ataxin 10
6404607Full LengthBC046802ataxin 10
3589791IncompleteBC002285ataxin 10

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016843 NP_058539 P28658  

Related Sequences

 
mRNAGenPeptSwissProt
BC002285 AAH02285 P28658
BC016410 AAH16410 P28658
BC046802 AAH46802 P28658
AK003530 BAB22840 P28658
AK047170 BAC32981 P28658
AK049706 BAC33884 Q8BWX1
AK078459 BAC37285 P28658
AK153271 BAE31858 P28658
AK165941 BAE38473 P28658
AK166899 BAE39102 Q3TKP3
AK170507 BAE41845 P28658
AK170751 BAE42002 Q3TCF4
X61506 CAA43722 P28658
X80418 CAA56623 Q62299
X80419 CAA56624 Q62300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atxn10 NP_058539 R.norvegicus Atxn10 170821   NP_579847 97
H.sapiens ATXN10 25814 Gene Info NP_037368 83
A.thaliana MEE50 826583   NP_567156 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)