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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Larp1, La ribonucleoprotein domain family, member 1
Sequence ID:NM_028451
Entrez Gene ID:73158
Ensembl ID:ENSMUSG00000037331

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 B2

Chromosomal Position (from UCSC)

Chromosomal Position:11: 58061351 - 58062030

 Exon Info From UCSC:
NM_028451

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6827516IncompleteBC063078La ribonucleoprotein domain family, member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028451 NP_082727    

Related Sequences

 
mRNAGenPeptSwissProt
BC053449 AAH53449 Q6ZQ58
AK129202 BAC98012 Q6ZQ58
AK138840 BAE23795 Q3UU34
AK169738 BAE41339 Q3TEA9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Larp1 NP_082727 R.norvegicus Larp1 303158   XP_220446 98
H.sapiens LARP1 23367 Gene Info NP_056130 92
D.melanogaster larp 53567   NP_733244 50
A.gambiae AgaP_AGAP005291 1270398   XP_001237175 48
A.thaliana AT5G21160 832242   NP_568409 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)