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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabra4, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
Sequence ID:NM_010251
Entrez Gene ID:14397
Ensembl ID:ENSMUSG00000029211

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 71641062 - 71642316

NM_010251 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124907196097271963461
249127507201509372015352
275129037202478472024936
290430477202937072029513
304831307203206672032148
313133517203230172032521
335234197203349772033564
342035387204840972048527
353941237204896272049546

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6828002Full LengthBC094603gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034381  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010251 NP_034381 Q543Z0
Q9D6F4
Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
AF090373 AAC35560 O88963
BC094603 AAH94603 Q543Z0
Q9D6F4
AK013727 BAB28975 Q543Z0
Q9D6F4
AK043806 BAC31659 Q543Z0
Q9D6F4
AK139970 BAE24201 Q3USX9
AK141571 BAE24741 Q3URE7
AK162893 BAE37103 Q3TRC7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabra4 NP_034381 R.norvegicus Gabra4 140675   NP_542154 97
H.sapiens GABRA4 2557 Gene Info NP_000800 91
D.melanogaster CG8916 32553   NP_573090 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta