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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gar1, GAR1 ribonucleoprotein homolog (yeast)
Sequence ID:NM_026578
Entrez Gene ID:68147
Ensembl ID:ENSMUSG00000028010

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 129824919 - 129831156

NM_026578 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2298129527830129528126
299367129528465129528533
368518129529741129529891
519578129531822129531881
579733129532254129532408
734992129533512129533770
9931271129534035129534313

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3709271Full LengthBC021873GAR1 ribonucleoprotein homolog (yeast)
6510731Full LengthBC048685GAR1 ribonucleoprotein homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080854  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026578 NP_080854 Q9CY66 Gar1

Related Sequences

 
mRNAGenPeptSwissProt
BC021873 AAH21873 Q9CY66
BC048685 AAH48685 Q9CY66
AK021256 BAB32351 Q9CY66
AK075923 BAC36056 Q9CY66
AK167001 BAE39180 Q3TKG5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gar1 NP_080854 R.norvegicus Gar1 499709   NP_001019477 99
H.sapiens GAR1 54433 Gene Info NP_061856 97
C.elegans Y66H1A.4 176870   NP_499927 73
D.melanogaster CG4038 37397   NP_477043 67
A.thaliana AT3G03920 821062   NP_566217 63
S.pombe gar1 2540705   NP_596365 63
S.cerevisiae GAR1 856489   NP_011957 62
N.crassa NCU07903 3878567   XP_962419 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)