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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tph1, tryptophan hydroxylase 1
Sequence ID:NM_001136084
NM_009414
Entrez Gene ID:21990
Ensembl ID:ENSMUSG00000040046

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46656949 - 46667377

 Exon Info From UCSC:
NM_001136084
NM_009414

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5718460Full LengthBC072582tryptophan hydroxylase 1
1245687IncompleteBC038864tryptophan hydroxylase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033440  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001136084 NP_001129556      
NM_009414 NP_033440 Q3UK52
P17532
EC 1.14.16.4 Biopterin_H
ACT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J04758 AAA63401 Q3UK52
P17532
EC 1.14.16.4
AF273257 AAF86975 Q9JHZ8  
BC072582 AAH72582 Q3UK52
P17532
EC 1.14.16.4
AK146134 BAE26925 Q3UK52
P17532
EC 1.14.16.4
AK146171 BAE26950 Q3UK52
P17532
EC 1.14.16.4
AK157858 BAE34236 Q3TZH2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tph1 NP_033440 R.norvegicus Tph1 24848   NP_001094104 96
H.sapiens TPH1 7166 Gene Info NP_004170 90
A.gambiae AgaP_AGAP006020 1276687   XP_316057 61
D.melanogaster Trh 38121   NP_612080 57
C.elegans tph-1 174227   NP_495584 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)