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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trim25, Tripartite motif-containing 25
Sequence ID:NM_009546
Entrez Gene ID:217069
Ensembl ID:ENSMUSG00000000275

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 89004256 - 89005013

NM_009546 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16808886071688861395
6817768886604288866137
77710108887043288870665
101111798887211888872286
118012428887478988874851
124312668887648088876503
126713658887684688876944
136614648887703288877130
146555638887750888881606

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2651664Full LengthBC006908tripartite motif-containing 25
4022161Full LengthBC034276tripartite motif-containing 25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033572  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009546 NP_033572 Q61510 EC 6.3.2.19
EC 6.3.2.n3
zf-C3HC4
SPRY

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC006908 AAH06908 Q922N9  
BC034276 AAH34276 Q6PIH1  
D63902 BAA09941 Q61510 EC 6.3.2.19
EC 6.3.2.n3
AK136434 BAE22976 Q3UWD9  
AK154533 BAE32658 Q3U3X7  
AK160898 BAE36077 Q3TU94  
AK169562 BAE41230 Q61510 EC 6.3.2.19
EC 6.3.2.n3
AK171744 BAE42646 Q3TAM2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim25 NP_033572 R.norvegicus Trim25 494338   NP_001009536 86
H.sapiens TRIM25 7706 Gene Info NP_005073 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)