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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tgfb1, transforming growth factor, beta 1
Sequence ID:NM_011577
Entrez Gene ID:21803
Ensembl ID:ENSMUSG00000002603

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 6.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 25687001 - 25704996

NM_011577 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112222647202026473241
122313832647739526477555
138415012647924126479358
150215792648193626482013
158017272648214326482290
172818812648914326489296
188220942648980226490014

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3586216Full LengthBC013738transforming growth factor, beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035707  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011577 NP_035707 Q3UNK5
P04202
TGF_beta
TGFb_propeptide

Related Sequences

 
mRNAGenPeptSwissProt
M13177 AAA40423 Q3UNK5
P04202
BC013738 AAH13738 Q3UNK5
P04202
AK144163 BAE25742 Q3UNK5
P04202
AJ009862 CAA08900 Q3UNK5
P04202

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tgfb1 NP_035707 R.norvegicus Tgfb1 59086   NP_067589 99
H.sapiens TGFB1 7040 Gene Info NP_000651 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta