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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hcfc1, host cell factor C1
Sequence ID:NM_008224
Entrez Gene ID:15161
Ensembl ID:ENSMUSG00000031386

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X C1|X 29.54 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 73954630 - 73958462

 Exon Info From UCSC:
NM_008224

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6509535Full LengthBC053742host cell factor C1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008224 NP_032250 Q61191  

Related Sequences

 
mRNAGenPeptSwissProt
BC053742 AAH53742 Q61191
AY184361 AAO24116 Q811S2
AK088827 BAC40597 Q3USQ6
Q61191
AK140197 BAE24275 Q3USQ6
AJ627036 CAF25305 Q61191

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hcfc1 NP_032250 R.norvegicus Hcfc1 363519   NP_001132979 99
H.sapiens HCFC1 3054 Gene Info NP_005325 95
C.elegans hcf-1 177560   NP_501279 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)