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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clec4e, C-type lectin domain family 4, member e
Sequence ID:NM_019948
Entrez Gene ID:56619
Ensembl ID:ENSMUSG00000030142

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6 59.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 123281788 - 123289871

NM_019948 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11908123231806123233713
19092024123235486123235601
20252176123236225123236376
21772263123236449123236535
22642359123238911123239006
23602519123239729123239888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158063Full LengthBC003218C-type lectin domain family 4, member e

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064332  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019948 NP_064332 Q9R0Q8
Q4FK29
Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC003218 AAH03218 Q9R0Q8
Q4FK29
AB024717 BAA83754 Q9R0Q8
Q4FK29
AK150528 BAE29637 Q9R0Q8
Q4FK29
AK150899 BAE29944 Q9R0Q8
Q4FK29
AK151101 BAE30111 Q9R0Q8
Q4FK29
AK151912 BAE30792 Q9R0Q8
Q4FK29
AK153008 BAE31647 Q9R0Q8
Q4FK29
AK153308 BAE31889 Q9R0Q8
Q4FK29
AK155452 BAE33271 Q3U271
AK156437 BAE33711 Q9R0Q8
Q4FK29
AK170698 BAE41962 Q9R0Q8
Q4FK29
AK171103 BAE42251 Q9R0Q8
Q4FK29
CT010223 CAJ18431 Q9R0Q8
Q4FK29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clec4e NP_064332 R.norvegicus Clec4e 450223   NP_001005897 89
H.sapiens CLEC4E 26253 Gene Info NP_055173 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)