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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrsam1, leucine rich repeat and sterile alpha motif containing 1
Sequence ID:NM_199302
Entrez Gene ID:227738
Ensembl ID:ENSMUSG00000026792

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 32933839 - 32938865

 Exon Info From UCSC:
NM_199302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6306042Full LengthBC049146leucine rich repeat and sterile alpha motif containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_955006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199302 NP_955006 Q80ZI6 LRR_1
SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
BC049146 AAH49146 Q80ZI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrsam1 NP_955006 R.norvegicus Lrsam1 311866   NP_001101303 96
H.sapiens LRSAM1 90678 Gene Info NP_001005373 88
A.gambiae AgaP_AGAP005053 4576263   XP_001230957 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)