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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cct2, chaperonin containing Tcp1, subunit 2 (beta)
Sequence ID:NM_007636
Entrez Gene ID:12461
Ensembl ID:ENSMUSG00000034024

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D2|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 117051003 - 117063786

 Exon Info From UCSC:
NM_007636

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601569Full LengthBC007470chaperonin containing Tcp1, subunit 2 (beta)
4500896Full LengthBC026918chaperonin containing Tcp1, subunit 2 (beta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031662  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007636 NP_031662 P80314 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC007470 AAH07470 Q542X7
P80314
BC026918 AAH26918 Q542X7
P80314
AB041570 BAA95054 Q9JJD8
AK075581 BAC35834 Q542X7
P80314
AK145406 BAE26419 Q542X7
P80314
AK166891 BAE39096 Q542X7
P80314
Z31553 CAA83428 P80314

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cct2 NP_031662 R.norvegicus Cct2 299809   NP_001005905 99
H.sapiens CCT2 10576 Gene Info NP_006422 98
A.gambiae AgaP_AGAP009694 1279082   XP_318752 73
D.melanogaster CG7033 31838   NP_572524 71
N.crassa NCU02207 3875675   XP_959526 68
C.elegans cct-2 174421   NP_741031 68
A.thaliana AT5G20890 832213   NP_197589 68
S.pombe cct2 2542212   NP_593017 67
S.cerevisiae CCT2 854664   NP_012124 66
P.falciparum PFC0285c 814386   XP_001351144 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)