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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pex19, peroxisomal biogenesis factor 19
Sequence ID:NM_001159525
NM_023041
Entrez Gene ID:19298
Ensembl ID:ENSMUSG00000003464

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 93.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 172126771 - 172135780

 Exon Info From UCSC:
NM_001159525
NM_023041

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4502819Full LengthBC019767peroxisomal biogenesis factor 19
3600320IncompleteBC012517peroxisomal biogenesis factor 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075528  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159525 NP_001152997    
NM_023041 NP_075528 Q8VCI5 Pex19

Related Sequences

 
mRNAGenPeptSwissProt
BC012517 AAH12517 Q8VCI5
BC019767 AAH19767 Q8VCI5
AK012785 BAB28468 Q8VCI5
AK028449 BAC25957 Q8VCI5
AK029368 BAC26421 Q8VCI5
AK170175 BAE41616 Q3TDI5
Y09046 CAA70255 Q3TDI5
Q8VCI5
CT010305 CAJ18513 Q8VCI5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pex19 NP_075528 R.norvegicus Pex19 289233   NP_001100845 94
R.norvegicus LOC100360976 100360976   XP_002728104 94
H.sapiens PEX19 5824 Gene Info NP_002848 91
C.elegans prx-19 176239   NP_498947 35
A.thaliana PEX19-2 831621   NP_568351 35
A.gambiae AgaP_AGAP008804 4577982   XP_001237621 33
D.melanogaster CG5325 34630   NP_609547 32
A.thaliana PEX19-1 821248   NP_186999 32
N.crassa NCU04301 3877213   XP_961091 31
S.cerevisiae PEX19 851494   NP_010218 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)