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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C5ar1, complement component 5a receptor 1
Sequence ID:NM_001173550
NM_007577
Entrez Gene ID:12273
Ensembl ID:ENSMUSG00000049130

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A2|7 3.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 16247257 - 16248943

 Exon Info From UCSC:
NM_001173550
NM_007577

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130156Full LengthBC125641complement component 5a receptor 1
40130158Full LengthBC125643complement component 5a receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031603  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173550 NP_001167021    
NM_007577 NP_031603 Q3TZ86 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC125641 AAI25642 Q3TZ86
BC125643 AAI25644 Q3TZ86
AY220494 AAP50849 Q3TZ86
AK150407 BAE29533 Q3UCS9
AK158027 BAE34324 Q3TZ86

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C5ar1 NP_001167021 H.sapiens C5AR1 728 Gene Info NP_001727 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)