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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prdx4, peroxiredoxin 4
Sequence ID:NM_016764
Entrez Gene ID:53381
Ensembl ID:ENSMUSG00000025289

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X F3|X 67.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 155323920 - 155338430

NM_016764 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1109151758462151758570
110144151761137151761171
145275151762988151763118
276398151764845151764967
399515151766898151767014
516633151769380151769497
634975151772655151772996

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2654429Full LengthBC019578peroxiredoxin 4
3481827Full LengthBC003349peroxiredoxin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058044  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016764 NP_058044 O08807 EC 1.11.1.15 AhpC-TSA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U96746 AAB57846 O08807 EC 1.11.1.15
BC003349 AAH03349 O08807 EC 1.11.1.15
BC019578 AAH19578 O08807 EC 1.11.1.15
AK005031 BAB23758 O08807 EC 1.11.1.15
AK014651 BAB29489 Q9D634  
AK029349 BAC26410 Q9D634  
AK146402 BAE27143 O08807 EC 1.11.1.15
AK152255 BAE31074 O08807 EC 1.11.1.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prdx4 NP_058044 R.norvegicus Prdx4 85274   NP_445964 97
H.sapiens PRDX4 10549 Gene Info NP_006397 91
A.gambiae TPX3 1269691   XP_308336 72
D.melanogaster Jafrac2 53577   NP_525002 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)