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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tdrd1, Tudor domain containing 1
Sequence ID:NM_001002241
NM_031387
NM_001002238
NM_001002240
Entrez Gene ID:83561
Ensembl ID:ENSMUSG00000025081

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D2|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 56831040 - 56870012

 Exon Info From UCSC:
NM_001002241
NM_031387
NM_001002238
NM_001002240

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40081321Full LengthBC129954tudor domain containing 1
40081323Full LengthBC129955tudor domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113564  NP_001002241  NP_001002240  NP_001002238  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002238 NP_001002238 Q99MV1 TUDOR
zf-MYND
NM_001002240 NP_001002240   TUDOR
zf-MYND
NM_001002241 NP_001002241   TUDOR
zf-MYND
NM_031387 NP_113564 Q99MV1 TUDOR

Related Sequences

 
mRNAGenPeptSwissProt
BC129954 AAI29955 Q99MV1
BC129955 AAI29956 Q99MV1
AF285591 AAK31970 Q99MV1
AB067571 BAC02433 Q99MV1
AK029806 BAC26625 Q99MV1
AB183526 BAD27575 Q99MV1
AB183527 BAD27576 Q99MV1
AB183528 BAD27577 Q99MV1
AB183529 BAD27578 Q99MV1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tdrd1 NP_001002238 R.norvegicus Tdrd1 292129   NP_001099672 88
H.sapiens TDRD1 56165 Gene Info NP_942090 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)