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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itln1, intelectin 1 (galactofuranose binding)
Sequence ID:NM_010584
Entrez Gene ID:16429
Ensembl ID:ENSMUSG00000038209

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 H2

Chromosomal Position (from UCSC)

Chromosomal Position:1: 171518123 - 171535293

NM_010584 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2271173448254173448523
272375173459251173459354
376496173460624173460744
497655173461164173461322
656903173461636173461883
9041002173463496173463594
10031066173464884173464947
10671139173465351173465423

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053935Full LengthBC145377intelectin 1 (galactofuranose binding)
9087671Full LengthBC150760intelectin 1 (galactofuranose binding)
9087706Full LengthBC150795intelectin 1 (galactofuranose binding)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034714  NP_001007553  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001007552 NP_001007553 Q80ZA0 Fibrinogen_C
NM_010584 NP_034714 O88310 Fibrinogen_C

Related Sequences

 
mRNAGenPeptSwissProt
BC145376 AAI45377 B7ZNQ5
BC145377 AAI45378 B2RWY7
BC150760 AAI50761 B2RWY7
BC150795 AAI50796 B9EK97
AY157363 AAO17802 O88310
AY157364 AAO17803 O88310
AY217760 AAO60215 Q80ZA0
AY619693 AAU88049 O88310
AB016496 BAA31992 O88310
AK007447 BAB25043 O88310

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itln1 NP_034714 R.norvegicus Itln1 498284   NP_001030118 88
H.sapiens ITLN1 55600 Gene Info NP_060095 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)