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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd59a, CD59a antigen
Sequence ID:NM_001111060
NM_007652
Entrez Gene ID:12509
Ensembl ID:ENSMUSG00000032679

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 104095852 - 104115349

 Exon Info From UCSC:
NM_001111060
NM_007652

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130366Full LengthBC132089CD59a antigen
40130392Full LengthBC132115CD59a antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111060 NP_001104530    
NM_007652 NP_031678 O55186 UPAR_LY6

Related Sequences

 
mRNAGenPeptSwissProt
U60473 AAC00055 O55186
BC132089 AAI32090 A2BI31
BC132115 AAI32116 A2BI31
AK002743 BAB22321 O55186
AK005507 BAB24087 O55186
AK018136 BAB31088 O55186
AK080728 BAC37996 O55186

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)